蜜桃传播传媒|欧美精品久久久久久久一区二区|91干炮视频|国产高清自拍一区|麻豆映画在线观看视频传媒www|巨乳美乳影院|日日干夜夜拍|177.sk 163.sk黑料不打烊|小视频福利|91爱看视频,广州爱豆文化传媒,人人爱人人看,91传媒制片厂苹果下载

課題組長(zhǎng)

潘瑋華,，研究員,，博士生導(dǎo)師，深圳市海外高層次人才,。2019年獲美國(guó)加州大學(xué)河濱分校計(jì)算機(jī)科學(xué)博士學(xué)位和統(tǒng)計(jì)學(xué)碩士學(xué)位,。2019-2020年在美國(guó)卡內(nèi)基梅隆大學(xué)計(jì)算機(jī)學(xué)院計(jì)算生物學(xué)系擔(dān)任Lane Fellow（博士后）,。長(zhǎng)期從事基因組學(xué)，尤其是基因組序列分析相關(guān)的生物信息算法研究。主要成果發(fā)表在頂級(jí)會(huì)議RECOMB,、ISMB和專業(yè)期刊National Science Review,、Molecular Plant、Bioinformatics,、Genomics Proteomics & Bioinformatics,、Plant Physiology等。主持國(guó)家自然科學(xué)基金,、深圳市優(yōu)秀科技創(chuàng)新人才培養(yǎng)項(xiàng)目等科研項(xiàng)目,。擔(dān)任中國(guó)生物信息學(xué)學(xué)會(huì)（籌）生物信息算法專委會(huì)委員、中國(guó)生物工程學(xué)會(huì)計(jì)算生物學(xué)與生物信息學(xué)專委會(huì)委員等,。擔(dān)任Frontiers in Plant Science和Genes等期刊客座編輯,。

課題組聯(lián)系方式：潘瑋華（[email protected]）、蔣和靈（[email protected]）

工作經(jīng)歷

2020.09-至今           中國(guó)農(nóng)業(yè)科學(xué)院（深圳）農(nóng)業(yè)基因組研究所,，研究員

2019.09-2020.08     美國(guó)卡內(nèi)基梅隆大學(xué),，Lane Fellow（博士后）

　　

教育經(jīng)歷

2014.09-2019.09        美國(guó)加州大學(xué)（河濱分校）, 計(jì)算機(jī)科學(xué), 博士

2016.09-2018.06        美國(guó)加州大學(xué)（河濱分校）, 統(tǒng)計(jì)學(xué), 碩士

2011.09-2014.06        中國(guó)科學(xué)技術(shù)大學(xué), 計(jì)算機(jī)軟件與理論, 碩士

2007.09-2011.06        南京師范大學(xué), 計(jì)算機(jī)科學(xué)與技術(shù), 學(xué)士

　　

研究方向

本團(tuán)隊(duì)主要從事基因組學(xué)相關(guān)的生物信息學(xué)算法研究。目前尤其關(guān)注于基因組組裝,、單體分型,、變異檢測(cè)等關(guān)鍵性計(jì)算問題。將前沿的基因組學(xué)技術(shù),，如PacBio HiFi,，Oxford Nanopore，Hi-C,，BioNano,，10x Genomics等，與先進(jìn)的計(jì)算技術(shù),，如組合優(yōu)化算法,、圖論、概率統(tǒng)計(jì),、機(jī)器學(xué)習(xí)等相結(jié)合,，開發(fā)新穎、準(zhǔn)確,、高效的算法用于攻克本領(lǐng)域尚未解決或完全解決的難題,，如多倍體基因組組裝,、端到端組裝,、單體型組裝、宏基因組組裝等,。并將開發(fā)的算法技術(shù)應(yīng)用于科研項(xiàng)目,，輔助解決重大科研問題。

論文發(fā)表情況

1. L. Ding ?, S. Wu ?, Z. Hou ?, A. Li, Y. Xu, H. Feng, W. Pan*, J. Ruan *. “Improving Error-Correcting Capability in DNA Digital Storage Via Soft-Decision Decoding.” National Science Review, 2023.

2. L. Shang?*, W. He?, T. Wang?, Y. Yang?, Q. Xu?, X. Zhao?, L. Yang, H. Zhang, X. Li, Y. Lv, W. Chen, S. Cao, X. Wang, B. Zhang, X. Liu, X. Yu, H. He, H. Wei, Y. Leng, C. Shi, M. Guo, Z. Zhang, B. Zhang, Q. Yuan, H. Qian, X. Cao, Y. Cui, Q. Zhang, X. Dai, C. Liu, L. Guo, Y. Zhou, X. Zheng, J. Ruan, Z. Cheng, W. Pan*, Q. Qian*. “A complete assembly of the rice Nipponbare reference genome.” Molecular Plant, vol 16, 2023.

3. D. Xu(?), Y. Yang(?), D. Gong(?), X. Chen(?), K. Jin, H. Jiang, W. Yu, J. Li(*), J. Zhang(*), W. Pan*. “GFAP: ultra-fast and accurate gene functional annotation software for plants.” Plant Physiology, 2023.

4. D. Xu(?), J. Zhang(?), X. Zhao(?), Y. Hou, H. Jiang, W. He*, X. Ma*, W. Pan*. “CIDP: a multi-functional platform for designing CRISPR sgRNAs.” Horticulture Research, vol 10, 2023.

5. J. Yang(?), X. Zhao(?), H. Jiang(?), Y. Yang(?), Y. Hou, W. Pan*. “RAfilter: an algorithm for detecting and filtering false-positive alignments in repetitive genomic regions.” Horticulture Research, vol 10, 2023.

6. D. Xu(?), Y. Song(?), X. Zhao, D. Gong, Y. Yang*, W. Pan*. “RAviz: a visualization tool for detecting false-positive alignments in repetitive genomic regions.” Horticulture Research, vol 9, 2022

7. W. Pan, J. Ruan. “En Route to Completion: What Is An Ideal Reference Genome?” Genomics, Proteomics & Bioinformatics, vol. 20, no. 1, pp. 1-3, 2022.

8. W. Pan, T. Jiang, S. Lonardi*. “OMGS: Optical Map-based Genome Scaffolding.” Proceedings of Conference on Research in Computational Molecular Biology (RECOMB), pp. 190-207, Washington, DC, 2019. 該文完整版發(fā)表于Journal of Computational Biology, vol. 27, no. 4, pp. 519-533, 2020.

9. W. Pan, S. Lonardi*. “Accurate detection of chimeric contigs via Bionano optical maps.” Bioinformatics, vol. 35, no. 10, pp. 1760-1762, 2019.

10. W. Pan, S. Wanamaker, A. Ah-Fong, H. Judelson, S. Lonardi*. “Novo&Stitch: Accurate Reconciliation of Genome Assemblies via Optical Maps.” Proceedings of Conference on Intelligent Systems for Molecular Biology (ISMB), Chicago, IL, 2018. 該文完整版發(fā)表于Bioinformatics, vol. 34, no. 13, pp. i43-i51, 2018.

11. W. Pan, B. Chen, Y. Xu*. “MetaObtainer: A Tool for Obtaining Specified Species from Metagenomic Reads of Next-generation Sequencing.” Interdisciplinary Sciences: Computational Life Sciences, vol. 7, no. 4, pp. 405-413, 2015.

12. W. Pan, Y. Zhao, Y. Xu*, F. Zhou*. “WinHAP2: an extremely fast haplotype phasing program for long genotype sequences.” BMC bioinformatics vol. 15, no. 1, pp. 164, 2014.